Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891417.1_cds_XP_016446209.1_41086
CDS Infomation

[gene=LOC107771370] [db_xref=GeneID:107771370] [protein=histidine kinase CKI1-like] [protein_id=XP_016446209.1] [location=join(69112..69165,69341..69421,69807..70182,71588..72180,72772..73908,74531..74752)] [gbkey=CDS]
Sequence

ATGAAGCTAAGCTCATTTAAAGTGCCAAAGCCGGTTTGTTTTTGCTTGGTTCTGGCAGTC
ATAATGCTATTGGTACCTGCTCTATTGATACCATTTTGGGTCAATAAGATCAAAAAAATT
GAAGGCGAAATTAAGGTGTATATATCAGGCAATGTACAAGATGTATTACAAAGCCATTTT
CACAAGAATATTAAATTTGGATTAATGCTTATAATCCTAATGATGGTTGGACTGGCTATT
TCCATATTCACTTTTGTTGTTCTAACAATAAGAGGAGCAAGAAGAGAAATGTATTTGTGT
TCAGCACTTATAAATCAAATGGAAGCAACTCAACAAGCAGAAAGGAAAAGTATGAACAAA
AGCACTGCATTTGTTCTTGCAAATCATGATATTAGAGCTTCTCTTGCTGGAATTAGTGGA
TTAATTGAGATGTGTCGCGCCAATGCTTCGCCAAAATCCGAATTGCAGAAGAATTTGAAT
CATATGGAAACTTGCACAAATAATCTTTTAGCAATATTGAATTCTATTCTTGATCAAAGC
AAGATTGAAGAAGGGAAGAAGCAACTTGAGCAAAAAGAATTCAACATGGAAGATCTACTA
GAATATGTTGTCAACTTATTTTATCCAAAAGGAGCAATGGATAATGTAGATGTGATACTA
GATCCGTGTGATGGTTCTATCAAAAGATTCTGTCGCGTTAAAGGAGATAAAACAGAACTA
GAACGGATCTTGACTAACTTGTTGAGTAATGCAGTTAAATTTACCTCAGAGGGGCACATT
ACTCTTCGAGTTTGGGCTCGAAAACCTGGTTTTGATCAAAGCTCCAATAATTCTGCACCA
AATACAAGTAACTCTGGCATTGGTTGTATGTCATGTTTACTTTTGCACAATAATAATGAA
GCTTCTGCTCAATTGCAAGTACAGGACAAAGTCCAGCACGATCCCAACTGCGTGGAATTC
ATATTCGAGGTGGAGGATACAGGGAAAGGAATTCCCAAAGAGAAACATAAGTCAGTGTTT
GAAAATTATGTTCAAGTGAATGAGACGACTTCTAACCACGAACAGCCAGGCACTGGCTTA
GGACTCGGCATTACTCAGTCTTTGGTACATTTGATGGGAGGCAAAATAAGTATCGTCGAC
AAGAAAATTGGTGCAAAGGGTACTTGCTTTAGATTCAACATTTTCTTGATAGCATGTGAT
TATCAGCCTCAACAACATCAAGCATTTAGTGCTAATAATGCAAGAGAAGATGATTTGGAG
TCACATTTTGGAGGTTATATATCTAGTGACTCTTATCATCATTCAGTAGCAAGCAGTAAT
AGTATCACTGGCCATCAGAAACCAGAAAGTTCTACTACTGTCATTCTTTTCATCAAAGAA
GAGGAAAGAAGCCGAGTTCTATGTAGATTCATGACGCGGATCATAGGCTTAGAGGTACAT
GCTGTGAGGCGACACGAGCAGTTTTCTCATACTCTTAAGAAGGTAAAAAGGGAAATTATC
AACTTTTCATCATACAACTCTGCCTCCTCCTCCTCAGGGAAATCAAAGGAAATTCCTCTC
AGTGCTTTAGATGGAACATATGATGATCATATCCCGTCGTTTCAGAGGAGGGGAAGAGGA
CTTCATTCTAAGAGCGCGCTTATAAGATTCATCTTGATTATAATTGACACAAATGCTGGC
CCCATTCGAGAAATAACTCGAGCTATGGCTGAATTTCGGAAGGACTTTCCCAAGAATGTT
TCCCTTCGAGTTGTTTGGCTCGATAAACCAGGGCTAGATGATGATAAGCTACCTTCAACA
GATATAGTTATGACAAAACCACTACATGGTTCTTGTTTATATCATGTTCTCGGATTTGTA
CCAGAGTTTGGAGATAAAATTTTACCAACTGTCACACATGAAACAAAGGATGAAACAACT
TCAAGAATGAGGGTTCAGCAACCTCCAATGAGGTCCAGAAGTCCGCCTTTAGAAGCGAAA
ACACGGGATGTTTCTGTTGATGTTAATGGAAGTTCTAATAAGAACTTACCTTTAACAGGA
AAGAGAATTTTGGTGGTTGAGGATAACGCGATATTACTTATGGTTTGCAAAAGAATGGTT
TCTCAGCTTGGTGCAATGACTTACACATGTAAAAATGGTGAACAAGCTCTAGCTCATGTT
CGCAAAGGCCTCAGTGATCAACGCGATATAGGACCGTCTACTCCTTCATCACCATTTGAT
TATATTCTGATGGATTGTGAGATGCCAGTGATGGATGGATTTGAAGCAACCAGATGCATT
AGGGAAGAAGAAGCGCGATATGGTATTCGAATTCCTATTATAGCTTTAACAGCTCATTCA
GCAGAAGAAGAGATCATAGCTAAGATTTTTCAAGTTGGAATGGATTATTACTTACCTGAT
AAACGAATCGATCGTGATGGGCTTTTGAAAGCCATAGATTATATAGAGCATAGAAAGGTT
TAA

Peptide Sequence

PEP ID

XP_016446209.1
PEP Infomation

PREDICTED: histidine kinase CKI1-like [Nicotiana tabacum]
Sequence

MKLSSFKVPKPVCFCLVLAVIMLLVPALLIPFWVNKIKKIEGEIKVYISGNVQDVLQSHF
HKNIKFGLMLIILMMVGLAISIFTFVVLTIRGARREMYLCSALINQMEATQQAERKSMNK
STAFVLANHDIRASLAGISGLIEMCRANASPKSELQKNLNHMETCTNNLLAILNSILDQS
KIEEGKKQLEQKEFNMEDLLEYVVNLFYPKGAMDNVDVILDPCDGSIKRFCRVKGDKTEL
ERILTNLLSNAVKFTSEGHITLRVWARKPGFDQSSNNSAPNTSNSGIGCMSCLLLHNNNE
ASAQLQVQDKVQHDPNCVEFIFEVEDTGKGIPKEKHKSVFENYVQVNETTSNHEQPGTGL
GLGITQSLVHLMGGKISIVDKKIGAKGTCFRFNIFLIACDYQPQQHQAFSANNAREDDLE
SHFGGYISSDSYHHSVASSNSITGHQKPESSTTVILFIKEEERSRVLCRFMTRIIGLEVH
AVRRHEQFSHTLKKVKREIINFSSYNSASSSSGKSKEIPLSALDGTYDDHIPSFQRRGRG
LHSKSALIRFILIIIDTNAGPIREITRAMAEFRKDFPKNVSLRVVWLDKPGLDDDKLPST
DIVMTKPLHGSCLYHVLGFVPEFGDKILPTVTHETKDETTSRMRVQQPPMRSRSPPLEAK
TRDVSVDVNGSSNKNLPLTGKRILVVEDNAILLMVCKRMVSQLGAMTYTCKNGEQALAHV
RKGLSDQRDIGPSTPSSPFDYILMDCEMPVMDGFEATRCIREEEARYGIRIPIIALTAHS
AEEEIIAKIFQVGMDYYLPDKRIDRDGLLKAIDYIEHRKV

Transcript Sequence

Gene sequence data has not been registered.